EnhancerDB
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  3. rs568500954[chr6:36627277]
Enhancers that have rs568500954[chr6:36627277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs568500954[chr6:36627277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36627267 36627283 SOX4 JASPAR yes 101355580
chr6 36627268 36627283 SOX21 JASPAR yes 101355581
Genes associated with rs568500954[chr6:36627277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More