EnhancerDB
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  3. rs56854280[chr15:99204698]
Enhancers that have rs56854280[chr15:99204698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99196125 99222955 enh16455
Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56854280[chr15:99204698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99204686 99204701 FOXP1 JASPAR yes 25817778
chr15 99204687 99204698 FOXA1 JASPAR yes 25817779
chr15 99204687 99204702 FOXA1 JASPAR yes 25817780
chr15 99204688 99204699 FOXB1 JASPAR yes 25817781
chr15 99204688 99204699 FOXC1 JASPAR yes 25817782
chr15 99204688 99204700 FOXC2 JASPAR yes 25817783
chr15 99204689 99204700 FOXP2 JASPAR yes 25817784
chr15 99204690 99204698 FOXO3 JASPAR yes 25817785
chr15 99204691 99204698 FOXD2 JASPAR yes 25817786
chr15 99204691 99204698 FOXI1 JASPAR yes 25817787
chr15 99204691 99204698 FOXL1 JASPAR yes 25817788
chr15 99204691 99204698 FOXO4 JASPAR yes 25817789
chr15 99204691 99204698 FOXO6 JASPAR yes 25817790
chr15 99204691 99204698 FOXP3 JASPAR yes 25817791
chr15 99204691 99204699 FOXD1 JASPAR yes 25817792
chr15 99204691 99204699 FOXG1 JASPAR yes 25817793
chr15 99204691 99204699 FOXO3 JASPAR yes 25817794
chr15 99204692 99204700 FOXL1 JASPAR yes 25817795
Genes associated with rs56854280[chr15:99204698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 99638420 99675798 + SYNM ENSG00000182253.10 99638420 433722 Stomach 0.121406 14300