EnhancerDB
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  3. rs568564848[chr11:122533680]
Enhancers that have rs568564848[chr11:122533680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs568564848[chr11:122533680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122533674 122533695 IRF1 JASPAR yes 42016063
chr11 122533675 122533696 IRF1 JASPAR yes 42016064
chr11 122533676 122533697 IRF1 JASPAR yes 42016065
chr11 122533677 122533692 FOXP1 JASPAR yes 42016066
chr11 122533677 122533698 IRF1 JASPAR yes 42016067
chr11 122533678 122533699 IRF1 JASPAR yes 42016068
chr11 122533679 122533694 FOXP1 JASPAR yes 42016069
chr11 122533679 122533700 IRF1 JASPAR yes 42016070
chr11 122533680 122533695 FOXP1 JASPAR yes 42016071
chr11 122533680 122533701 IRF1 JASPAR yes 42016072
Genes associated with rs568564848[chr11:122533680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More