EnhancerDB
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  3. rs56857499[chr3:124546835]
Enhancers that have rs56857499[chr3:124546835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56857499[chr3:124546835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124546822 124546842 RREB1 JASPAR yes 5404472
chr3 124546825 124546839 PLAG1 JASPAR yes 5404475
chr3 124546825 124546845 RREB1 JASPAR yes 5404476
chr3 124546826 124546840 PLAG1 JASPAR yes 5404477
chr3 124546827 124546847 RREB1 JASPAR yes 5404478
chr3 124546832 124546837 SP1 TRANSFAC yes 5404479
chr3 124546833 124546841 WT1 TRANSFAC yes 5404480
Genes associated with rs56857499[chr3:124546835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More