EnhancerDB
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  3. rs568633996[chr12:125211422]
Enhancers that have rs568633996[chr12:125211422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568633996[chr12:125211422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125211378 125211771 TCF7L2 GTRD no Colon (HCT116) 21582356
chr12 125211418 125211428 ELK1 JASPAR yes 124414129
chr12 125211418 125211430 ELF1 JASPAR yes 124414130
chr12 125211422 125211428 ETS1 JASPAR yes 124414131
chr12 125211422 125211428 SPI1 JASPAR yes 124414132
Genes associated with rs568633996[chr12:125211422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More