EnhancerDB
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  3. rs56865878[chr2:38654857]
Enhancers that have rs56865878[chr2:38654857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs56865878[chr2:38654857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38654848 38654860 NHLH1 JASPAR yes 73139034
chr2 38654849 38654859 NHLH1 JASPAR yes 73139035
Genes associated with rs56865878[chr2:38654857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 39186764 39187483 - AC019171.1 ENSG00000269210.1 39187483 531907 Esophagus 0.298785 2295