EnhancerDB
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  3. rs568684892[chr1:235126100]
Enhancers that have rs568684892[chr1:235126100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568684892[chr1:235126100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235124808 235126532 ZNF274 GTRD no Bone Marrow (K562) 21402698
chr1 235124808 235126532 ZNF274 GTRD no Bone Marrow (K562) 107885432
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402704
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402705
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 107885433
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402706
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402707
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 107885434
chr1 235125675 235126455 ZNF274 GTRD no Bone Marrow (K562) 21402709
chr1 235125675 235126455 ZNF274 GTRD no Bone Marrow (K562) 107885435
chr1 235125722 235126360 ZNF143 GTRD no Epithelial (MCF-7) 21402710
chr1 235125722 235126360 ZNF143 GTRD no Epithelial (MCF-7) 107885436
chr1 235125895 235126306 ZNF274 GTRD no Bone Marrow (K562) 21402711
chr1 235125895 235126306 ZNF274 GTRD no Bone Marrow (K562) 107885437
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 21402712
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 107885438
chr1 235125969 235126485 TCF7L2 GTRD no Colon (HCT116) 21402713
chr1 235125969 235126485 TCF7L2 GTRD no Colon (HCT116) 107885439
chr1 235126090 235126103 SMAD2 JASPAR yes 36339231
Genes associated with rs568684892[chr1:235126100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More