EnhancerDB
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  3. rs568728229[chr19:5961750]
Enhancers that have rs568728229[chr19:5961750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568728229[chr19:5961750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5961743 5961755 IRF1 JASPAR yes 112248756
chr19 5961743 5961758 FOXP1 JASPAR yes 112248757
chr19 5961743 5961764 IRF1 JASPAR yes 112248758
chr19 5961745 5961765 RREB1 JASPAR yes 112248759
chr19 5961748 5961760 IRF1 JASPAR yes 112248760
chr19 5961748 5961763 FOXP1 JASPAR yes 112248761
chr19 5961748 5961769 IRF1 JASPAR yes 112248762
chr19 5961750 5961770 RREB1 JASPAR yes 112248763
Genes associated with rs568728229[chr19:5961750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More