EnhancerDB
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  3. rs56886540[chr3:58017570]
Enhancers that have rs56886540[chr3:58017570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56886540[chr3:58017570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58017560 58017571 GCM1 JASPAR yes 2666636
chr3 58017561 58017571 GCM2 JASPAR yes 2666637
chr3 58017561 58017573 INSM1 JASPAR yes 2666638
Genes associated with rs56886540[chr3:58017570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More