EnhancerDB
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  3. rs568888380[chr12:53964949]
Enhancers that have rs568888380[chr12:53964949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs568888380[chr12:53964949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53964938 53964953 JUND JASPAR yes 120992480
chr12 53964939 53964952 JUN JASPAR yes 120992481
chr12 53964940 53964953 ATF4 JASPAR yes 120992482
chr12 53964941 53964953 DBP JASPAR yes 120992483
chr12 53964941 53964953 HLF JASPAR yes 120992484
chr12 53964941 53964953 JDP2 JASPAR yes 120992485
chr12 53964941 53964953 TEF JASPAR yes 120992486
chr12 53964943 53964954 NFIL3 JASPAR yes 120992487
chr12 53964947 53964962 RUNX2 JASPAR yes 120992488
chr12 53964948 53964951 MYB TRANSFAC yes 120992489
chr12 53964948 53964957 RUNX2 JASPAR yes 120992490
chr12 53964948 53964958 RUNX3 JASPAR yes 120992491
chr12 53964948 53964959 RUNX1 JASPAR yes 120992492
Genes associated with rs568888380[chr12:53964949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More