EnhancerDB
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  3. rs56893397[chr17:2114395]
Enhancers that have rs56893397[chr17:2114395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56893397[chr17:2114395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2114387 2114397 HOXD13 JASPAR yes 52737951
chr17 2114387 2114398 HOXA10 JASPAR yes 52737952
chr17 2114392 2114407 FOXP1 JASPAR yes 52737953
chr17 2114392 2114413 IRF1 JASPAR yes 52737954
chr17 2114393 2114408 FOXP1 JASPAR yes 52737955
chr17 2114394 2114400 TBP TRANSFAC yes 52737956
chr17 2114394 2114409 FOXP1 JASPAR yes 52737957
Genes associated with rs56893397[chr17:2114395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More