EnhancerDB
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  3. rs56909661[chr1:203526189]
Enhancers that have rs56909661[chr1:203526189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs56909661[chr1:203526189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 21369490
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 107859069
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 107859070
chr1 203525906 203527582 ZNF274 GTRD no Cervix (HeLa-S3) 21369491
chr1 203525906 203527582 ZNF274 GTRD no Cervix (HeLa-S3) 107859071
chr1 203525911 203528089 ZNF143 GTRD no Epithelial (MCF-7) 107859072
chr1 203525927 203527340 ZNF143 GTRD no Epithelial (MCF-7) 107859073
chr1 203525931 203527248 ZNF143 GTRD no Epithelial (MCF-7) 107859074
chr1 203525956 203527384 ZNF274 GTRD no Cervix (HeLa-S3) 21369492
chr1 203525956 203527384 ZNF274 GTRD no Cervix (HeLa-S3) 107859075
chr1 203526179 203526200 ZNF263 JASPAR yes 34639868
chr1 203526182 203526203 ZNF263 JASPAR yes 34639869
chr1 203526184 203526194 NFATC3 JASPAR yes 34639870
chr1 203526185 203526192 NFATC2 JASPAR yes 34639871
chr1 203526189 203526200 FLI1 JASPAR yes 34639872
Genes associated with rs56909661[chr1:203526189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More