EnhancerDB
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  3. rs56931210[chr1:19789588]
Enhancers that have rs56931210[chr1:19789588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56931210[chr1:19789588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19789580 19789601 ZNF263 JASPAR yes 27193854
chr1 19789583 19789596 ELF1 JASPAR yes 27193855
chr1 19789586 19789597 FLI1 JASPAR yes 27193856
chr1 19789587 19789595 EHF JASPAR yes 27193857
chr1 19789588 19789602 STAT1 JASPAR yes 27193858
chr1 19789588 19789603 PRDM1 JASPAR yes 27193859
Genes associated with rs56931210[chr1:19789588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 19630459 19638640 - AKR7A2 ENSG00000053371.8 19638640 150948 Esophagus 2.04446e-06 260