EnhancerDB
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  3. rs56947628[chr15:67166189]
Enhancers that have rs56947628[chr15:67166189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67152440 67182466 enh3668
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56947628[chr15:67166189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67165525 67166813 P63 GTRD no Skin (Keratinocyte) 21661525
chr15 67165547 67166334 SOX2 GTRD no Neural Stem Cells (H9) 21661526
chr15 67165923 67166344 SOX2 GTRD no Neural Stem Cells (H9) 21661528
chr15 67165933 67166862 P63 GTRD no Skin (Keratinocyte) 21661529
chr15 67165938 67166946 P63 GTRD no Skin (Keratinocyte) 21661530
chr15 67165965 67166889 P63 GTRD no Skin (Keratinocyte) 21661531
chr15 67166084 67166433 ZNF143 GTRD no Epithelial (MCF-7) 21661532
chr15 67166183 67166198 FOXP1 JASPAR yes 24183792
chr15 67166183 67166198 MEF2C JASPAR yes 24183793
chr15 67166185 67166197 MEF2A JASPAR yes 24183794
chr15 67166188 67166200 IRF1 JASPAR yes 24183795
chr15 67166188 67166203 FOXP1 JASPAR yes 24183796
chr15 67166188 67166209 IRF1 JASPAR yes 24183797
Genes associated with rs56947628[chr15:67166189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More