EnhancerDB
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  3. rs56948270[chr14:77490527]
Enhancers that have rs56948270[chr14:77490527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 77458104 77493935 enh3336
Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56948270[chr14:77490527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 77490371 77490971 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21632212
chr14 77490418 77490998 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21632213
chr14 77490427 77490687 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21632214
chr14 77490468 77490732 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21632215
chr14 77490479 77490703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21632216
chr14 77490493 77490817 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21632217
chr14 77490494 77490754 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21632218
chr14 77490500 77490646 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21632219
chr14 77490507 77490637 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21632220
chr14 77490517 77490527 NKX2-3 JASPAR yes 116721522
chr14 77490520 77491040 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21632221
Genes associated with rs56948270[chr14:77490527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More