EnhancerDB
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  3. rs56949721[chr6:43995444]
Enhancers that have rs56949721[chr6:43995444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56949721[chr6:43995444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43995430 43995448 NR3C1 JASPAR yes 101814454
chr6 43995440 43995455 LEF1 JASPAR yes 101814455
chr6 43995441 43995455 TCF7L2 JASPAR yes 101814456
Genes associated with rs56949721[chr6:43995444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More