EnhancerDB
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  3. rs569530082[chr12:53954275]
Enhancers that have rs569530082[chr12:53954275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs569530082[chr12:53954275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53954266 53954276 GSC2 JASPAR yes 120990778
chr12 53954266 53954276 GSC JASPAR yes 120990779
chr12 53954267 53954275 OTX1 JASPAR yes 120990780
chr12 53954267 53954276 PITX3 JASPAR yes 120990781
Genes associated with rs569530082[chr12:53954275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More