EnhancerDB
  1. Home
  2. SNP
  3. rs569572409[chr6:16342585]
Enhancers that have rs569572409[chr6:16342585]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569572409[chr6:16342585]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16342572 16342587 FOXP1 JASPAR yes 100289829
chr6 16342573 16342588 STAT2 JASPAR yes 100289830
chr6 16342574 16342589 FOXP1 JASPAR yes 100289831
chr6 16342574 16342595 IRF1 JASPAR yes 100289832
chr6 16342576 16342588 FOXC2 JASPAR yes 100289833
chr6 16342577 16342588 FOXP2 JASPAR yes 100289834
chr6 16342577 16342941 TEAD4 UCSC Txn Factor no Conserved 108538869
chr6 16342578 16342593 STAT2 JASPAR yes 100289835
chr6 16342579 16342591 IRF1 JASPAR yes 100289836
chr6 16342579 16342594 FOXP1 JASPAR yes 100289837
chr6 16342579 16342600 IRF1 JASPAR yes 100289838
chr6 16342580 16342601 IRF1 JASPAR yes 100289839
chr6 16342582 16342596 IRF7 JASPAR yes 100289840
chr6 16342583 16342601 SRF JASPAR yes 100289841
chr6 16342585 16342600 MEF2C JASPAR yes 100289842
chr6 16342585 16342606 IRF1 JASPAR yes 100289843
Genes associated with rs569572409[chr6:16342585], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More