EnhancerDB
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  3. rs569813396[chr15:42220418]
Enhancers that have rs569813396[chr15:42220418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569813396[chr15:42220418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42220407 42220421 ONECUT2 JASPAR yes 23006223
chr15 42220408 42220419 FOXH1 JASPAR yes 23006224
chr15 42220409 42220420 FOXC1 JASPAR yes 23006225
chr15 42220409 42220421 FOXC2 JASPAR yes 23006226
chr15 42220411 42220424 SCRT2 JASPAR yes 23006227
Genes associated with rs569813396[chr15:42220418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More