EnhancerDB
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  3. rs56981445[chr2:38678908]
Enhancers that have rs56981445[chr2:38678908]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs56981445[chr2:38678908]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38678887 38678908 ZNF263 JASPAR yes 73142536
chr2 38678888 38678909 IRF1 JASPAR yes 73142538
chr2 38678890 38678911 ZNF263 JASPAR yes 73142540
chr2 38678892 38678913 IRF1 JASPAR yes 73142543
chr2 38678893 38678908 FOXP1 JASPAR yes 73142544
chr2 38678894 38678909 PRDM1 JASPAR yes 73142545
chr2 38678894 38678909 STAT2 JASPAR yes 73142546
chr2 38678894 38678915 IRF1 JASPAR yes 73142547
chr2 38678898 38678919 IRF1 JASPAR yes 73142548
chr2 38678900 38678915 PRDM1 JASPAR yes 73142549
chr2 38678900 38678915 STAT2 JASPAR yes 73142550
chr2 38678901 38678915 SPIC JASPAR yes 73142551
chr2 38678901 38678915 STAT1 JASPAR yes 73142552
chr2 38678902 38678923 IRF1 JASPAR yes 73142553
chr2 38678903 38678918 FOXP1 JASPAR yes 73142554
chr2 38678903 38678924 IRF1 JASPAR yes 73142555
chr2 38678904 38678925 IRF1 JASPAR yes 73142556
chr2 38678905 38678920 FOXP1 JASPAR yes 73142557
chr2 38678905 38678926 IRF1 JASPAR yes 73142558
chr2 38678906 38678927 IRF1 JASPAR yes 73142559
chr2 38678907 38678922 FOXP1 JASPAR yes 73142560
chr2 38678907 38678928 IRF1 JASPAR yes 73142561
chr2 38678908 38678923 FOXP1 JASPAR yes 73142562
chr2 38678908 38678929 IRF1 JASPAR yes 73142563
Genes associated with rs56981445[chr2:38678908], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More