EnhancerDB
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  3. rs569853444[chr1:41876805]
Enhancers that have rs569853444[chr1:41876805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs569853444[chr1:41876805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41876796 41876817 IRF1 JASPAR yes 28386838
chr1 41876799 41876813 SPI1 JASPAR yes 28386839
chr1 41876799 41876820 IRF1 JASPAR yes 28386840
chr1 41876802 41876817 FOXP1 JASPAR yes 28386841
chr1 41876804 41876819 FOXP1 JASPAR yes 28386842
chr1 41876805 41876820 FOXP1 JASPAR yes 28386843
Genes associated with rs569853444[chr1:41876805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More