EnhancerDB
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  3. rs569934477[chr17:55995029]
Enhancers that have rs569934477[chr17:55995029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569934477[chr17:55995029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55995023 55995034 ESRRA JASPAR yes 54999028
chr17 55995023 55995034 ESRRB JASPAR yes 54999029
chr17 55995023 55995036 NR2F1 JASPAR yes 54999030
chr17 55995025 55995033 NR4A2 JASPAR yes 54999031
chr17 55995027 55995031 ESR1 TRANSFAC yes 54999032
Genes associated with rs569934477[chr17:55995029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More