EnhancerDB
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  3. rs569973909[chr1:59479345]
Enhancers that have rs569973909[chr1:59479345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 59468825 59488575 enh11918
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs569973909[chr1:59479345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 59478685 59479369 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107807143
chr1 59478744 59479404 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107807145
chr1 59478765 59479395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107807146
chr1 59478820 59479456 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107807147
chr1 59478820 59479456 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107807148
chr1 59478827 59479417 IKZF1 UCSC Txn Factor no Conserved 107807149
chr1 59478827 59479417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107807150
chr1 59478837 59479433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107807151
chr1 59478862 59479382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107807153
chr1 59479327 59479346 PAX5 JASPAR yes 29273387
chr1 59479336 59479356 ESR1 JASPAR yes 29273388
chr1 59479340 59479358 ESR1 JASPAR yes 29273389
chr1 59479340 59479358 ESR2 JASPAR yes 29273390
Genes associated with rs569973909[chr1:59479345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More