EnhancerDB
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  3. rs570004206[chr12:52520155]
Enhancers that have rs570004206[chr12:52520155]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs570004206[chr12:52520155]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52519705 52520959 ZNF143 GTRD no Epithelial (MCF-7) 21546244
chr12 52519737 52520933 ZNF143 GTRD no Epithelial (MCF-7) 21546245
chr12 52520151 52520162 STAT1 JASPAR yes 120919552
chr12 52520151 52520162 STAT3 JASPAR yes 120919553
chr12 52520151 52520164 ELF1 JASPAR yes 120919554
chr12 52520154 52520161 ETS1 TRANSFAC yes 120919555
Genes associated with rs570004206[chr12:52520155], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More