EnhancerDB
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  3. rs570050224[chr1:234670403]
Enhancers that have rs570050224[chr1:234670403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570050224[chr1:234670403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234669903 234670419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21394139
chr1 234669903 234670419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107880386
chr1 234670344 234670520 ZNF274 GTRD no Bone Marrow (K562) 21394140
chr1 234670388 234670403 HNF4A JASPAR yes 36284981
chr1 234670394 234670405 ESRRA JASPAR yes 36284982
chr1 234670394 234670405 ESRRB JASPAR yes 36284983
chr1 234670395 234670403 NR4A2 JASPAR yes 36284984
chr1 234670396 234670406 RORA JASPAR yes 36284985
chr1 234670403 234670424 ZNF263 JASPAR yes 36284986
Genes associated with rs570050224[chr1:234670403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More