EnhancerDB
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  3. rs570171676[chr12:116977988]
Enhancers that have rs570171676[chr12:116977988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs570171676[chr12:116977988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116977438 116978345 ZNF274 GTRD no Blood (GM12878) 21577350
chr12 116977438 116978345 ZNF274 GTRD no Blood (GM12878) 108061769
chr12 116977491 116978438 ZNF274 GTRD no Blood (GM12878) 21577351
chr12 116977491 116978438 ZNF274 GTRD no Blood (GM12878) 108061770
chr12 116977662 116978332 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108061771
chr12 116977676 116978397 MEF2B GTRD no Blood (Karpas-422) 108061772
chr12 116977808 116978298 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108061773
chr12 116977984 116977996 NHLH1 JASPAR yes 124008978
Genes associated with rs570171676[chr12:116977988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More