EnhancerDB
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  3. rs570174397[chr12:122586121]
Enhancers that have rs570174397[chr12:122586121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs570174397[chr12:122586121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122586109 122586130 IRF1 JASPAR yes 124265611
chr12 122586111 122586126 FOXP1 JASPAR yes 124265613
chr12 122586111 122586132 IRF1 JASPAR yes 124265614
chr12 122586115 122586136 IRF1 JASPAR yes 124265615
chr12 122586116 122586131 FOXP1 JASPAR yes 124265616
chr12 122586117 122586132 STAT2 JASPAR yes 124265617
chr12 122586119 122586140 IRF1 JASPAR yes 124265618
chr12 122586120 122586135 FOXP1 JASPAR yes 124265619
chr12 122586120 122586141 IRF1 JASPAR yes 124265620
chr12 122586121 122586136 FOXP1 JASPAR yes 124265621
chr12 122586121 122586142 IRF1 JASPAR yes 124265622
Genes associated with rs570174397[chr12:122586121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More