EnhancerDB
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  3. rs57048296[chr2:240187001]
Enhancers that have rs57048296[chr2:240187001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240186875 240187303 vista35495
VISTA
Transcript factors that have rs57048296[chr2:240187001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240186903 240187259 RCOR1 UCSC Txn Factor no Conserved 108436008
chr2 240186998 240187008 TBX21 JASPAR yes 22245510
chr2 240186998 240187008 TBX21 JASPAR yes 82223270
chr2 240186998 240187011 EOMES JASPAR yes 22245511
chr2 240186998 240187011 EOMES JASPAR yes 82223271
chr2 240186999 240187007 MGA JASPAR yes 22245512
chr2 240186999 240187007 TBX1 JASPAR yes 22245513
chr2 240186999 240187007 MGA JASPAR yes 82223272
chr2 240186999 240187007 TBX1 JASPAR yes 82223273
Genes associated with rs57048296[chr2:240187001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More