EnhancerDB
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  3. rs570653305[chr17:28060218]
Enhancers that have rs570653305[chr17:28060218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs570653305[chr17:28060218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28060207 28060222 FOXP1 JASPAR yes 53755175
chr17 28060208 28060219 FOXA1 JASPAR yes 53755176
chr17 28060209 28060221 FOXC2 JASPAR yes 53755177
chr17 28060214 28060226 FOXI1 JASPAR yes 53755178
chr17 28060214 28060234 RREB1 JASPAR yes 53755179
chr17 28060217 28060227 HOXB13 JASPAR yes 53755180
chr17 28060218 28060233 FOXP1 JASPAR yes 53755181
chr17 28060218 28060239 IRF1 JASPAR yes 53755182
Genes associated with rs570653305[chr17:28060218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More