EnhancerDB
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  3. rs570861952[chr1:235126773]
Enhancers that have rs570861952[chr1:235126773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570861952[chr1:235126773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402704
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402705
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 107885433
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402706
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402707
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 107885434
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 21402712
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 107885438
chr1 235126573 235126925 ZNF274 GTRD no Blood (GM12878) 21402715
chr1 235126617 235126881 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402716
chr1 235126665 235129439 ZNF274 GTRD no Bone Marrow (K562) 21402717
chr1 235126686 235129470 ZNF274 GTRD no Bone Marrow (K562) 21402718
chr1 235126707 235126947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402719
chr1 235126707 235127312 ZNF274 GTRD no Liver (HepG2) 21402720
chr1 235126727 235129486 ZNF274 GTRD no Blood (GM12878) 21402721
chr1 235126732 235127946 ZNF274 GTRD no Bone Marrow (K562) 21402722
chr1 235126742 235131363 ZNF274 GTRD no Liver (HepG2) 21402723
chr1 235126742 235131363 ZNF274 GTRD no Liver (HepG2) 21402724
chr1 235126771 235126786 TFAP2C JASPAR yes 36339312
chr1 235126772 235126783 EBF1 JASPAR yes 36339313
Genes associated with rs570861952[chr1:235126773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More