EnhancerDB
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  3. rs570868200[chr15:42234445]
Enhancers that have rs570868200[chr15:42234445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570868200[chr15:42234445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42234433 42234454 IRF1 JASPAR yes 23008244
chr15 42234439 42234460 IRF1 JASPAR yes 23008245
chr15 42234440 42234446 TCF4 TRANSFAC yes 23008246
chr15 42234440 42234455 FOXP1 JASPAR yes 23008247
chr15 42234440 42234461 IRF1 JASPAR yes 23008248
chr15 42234441 42234452 FOXP2 JASPAR yes 23008249
chr15 42234441 42234453 FOXC2 JASPAR yes 23008250
chr15 42234441 42234456 STAT2 JASPAR yes 23008251
chr15 42234441 42234462 IRF1 JASPAR yes 23008252
chr15 42234442 42234457 FOXP1 JASPAR yes 23008253
chr15 42234444 42234459 FOXP1 JASPAR yes 23008254
chr15 42234445 42234460 FOXP1 JASPAR yes 23008255
Genes associated with rs570868200[chr15:42234445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More