EnhancerDB
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  3. rs571107166[chr1:19721380]
Enhancers that have rs571107166[chr1:19721380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571107166[chr1:19721380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19721371 19721385 RXRG JASPAR yes 27184869
chr1 19721371 19721386 HNF4G JASPAR yes 27184870
chr1 19721371 19721386 LEF1 JASPAR yes 27184871
chr1 19721373 19721387 ONECUT2 JASPAR yes 27184872
chr1 19721373 19721387 ONECUT3 JASPAR yes 27184873
Genes associated with rs571107166[chr1:19721380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More