EnhancerDB
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  3. rs571143252[chr5:77786569]
Enhancers that have rs571143252[chr5:77786569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs571143252[chr5:77786569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77786566 77786581 FOXP1 JASPAR yes 63591850
chr5 77786567 77786582 FOXP1 JASPAR yes 63591851
chr5 77786568 77786583 FOXP1 JASPAR yes 63591852
chr5 77786569 77786584 FOXP1 JASPAR yes 63591853
chr5 77786569 77786590 IRF1 JASPAR yes 63591854
Genes associated with rs571143252[chr5:77786569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More