EnhancerDB
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  3. rs571205886[chr10:29874447]
Enhancers that have rs571205886[chr10:29874447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29869734 29882850 enh13093
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571205886[chr10:29874447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29874432 29874447 PRDM1 JASPAR yes 126328076
chr10 29874432 29874447 STAT2 JASPAR yes 126328077
chr10 29874434 29874455 IRF1 JASPAR yes 126328078
chr10 29874437 29874451 IRF7 JASPAR yes 126328079
chr10 29874438 29874453 PRDM1 JASPAR yes 126328080
chr10 29874446 29874454 HOXA5 JASPAR yes 126328081
Genes associated with rs571205886[chr10:29874447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More