EnhancerDB
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  3. rs571253103[chr17:56030964]
Enhancers that have rs571253103[chr17:56030964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571253103[chr17:56030964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56030964 56030973 SNAI2 JASPAR yes 55004389
chr17 56030964 56030974 FIGLA JASPAR yes 55004390
chr17 56030964 56030974 ID4 JASPAR yes 55004391
chr17 56030964 56030974 TCF3 JASPAR yes 55004392
chr17 56030964 56030974 TCF4 JASPAR yes 55004393
Genes associated with rs571253103[chr17:56030964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More