EnhancerDB
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  3. rs571282252[chr6:11202822]
Enhancers that have rs571282252[chr6:11202822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571282252[chr6:11202822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11202812 11202825 ZBTB18 JASPAR yes 99863483
chr6 11202813 11202823 MAX JASPAR yes 99863484
chr6 11202813 11202824 USF2 JASPAR yes 99863485
chr6 11202813 11202828 SCRT1 JASPAR yes 99863486
chr6 11202814 11202824 NEUROD2 JASPAR yes 99863487
chr6 11202814 11202824 NEUROG2 JASPAR yes 99863488
Genes associated with rs571282252[chr6:11202822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More