EnhancerDB
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  3. rs571405478[chr19:5959821]
Enhancers that have rs571405478[chr19:5959821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571405478[chr19:5959821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5959807 5959822 HNF4A JASPAR yes 112248486
chr19 5959808 5959822 NR2F1 JASPAR yes 112248487
chr19 5959808 5959823 HNF4G JASPAR yes 112248488
chr19 5959817 5959821 YY1 TRANSFAC yes 112248489
chr19 5959820 5959834 TLX1 JASPAR yes 112248490
Genes associated with rs571405478[chr19:5959821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More