EnhancerDB
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  3. rs571429986[chr17:43366818]
Enhancers that have rs571429986[chr17:43366818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs571429986[chr17:43366818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43366625 43367514 TCF7L2 GTRD no Colon (HCT116) 21763787
chr17 43366652 43370488 ZNF274 GTRD no Blood (GM12878) 21763788
chr17 43366660 43370501 ZNF274 GTRD no Liver (HepG2) 21763789
chr17 43366695 43367171 ZNF274 GTRD no Blood (GM12878) 21763790
chr17 43366695 43369600 ZNF274 GTRD no Blood (GM12878) 21763791
chr17 43366712 43368946 TCF7L2 GTRD no Colon (HCT116) 21763792
chr17 43366807 43366828 ZNF263 JASPAR yes 54439851
chr17 43366814 43366818 H1TF2 TRANSFAC yes 54439853
chr17 43366814 43366818 NFE TRANSFAC yes 54439854
chr17 43366814 43366818 SRF TRANSFAC yes 54439855
Genes associated with rs571429986[chr17:43366818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More