EnhancerDB
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  3. rs571952922[chr1:226839781]
Enhancers that have rs571952922[chr1:226839781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226839418 226839818 vista5361
VISTA
Transcript factors that have rs571952922[chr1:226839781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226839303 226839945 P63 GTRD no Skin (Keratinocyte) 21387022
chr1 226839303 226839945 P63 GTRD no Skin (Keratinocyte) 107875880
chr1 226839324 226840094 P63 GTRD no Skin (Keratinocyte) 21387023
chr1 226839324 226840094 P63 GTRD no Skin (Keratinocyte) 107875881
chr1 226839375 226839868 P63 GTRD no Skin (Keratinocyte) 21387024
chr1 226839375 226839868 P63 GTRD no Skin (Keratinocyte) 107875882
chr1 226839465 226839843 P63 GTRD no Skin (Keratinocyte) 21387025
chr1 226839465 226839843 P63 GTRD no Skin (Keratinocyte) 107875883
chr1 226839779 226839794 MEF2C JASPAR yes 35827797
chr1 226839779 226839794 MEF2C JASPAR yes 118471276
chr1 226839780 226839795 MEF2A JASPAR yes 35827798
chr1 226839780 226839795 MEF2A JASPAR yes 118471277
chr1 226839781 226839793 MEF2A JASPAR yes 35827799
chr1 226839781 226839793 MEF2A JASPAR yes 118471278
Genes associated with rs571952922[chr1:226839781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More