EnhancerDB
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  3. rs571991342[chr14:55131516]
Enhancers that have rs571991342[chr14:55131516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55101597 55134083 enh3199
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs571991342[chr14:55131516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55131510 55131520 GSX1 JASPAR yes 115499168
chr14 55131510 55131520 GSX2 JASPAR yes 115499169
chr14 55131511 55131519 LMX1A JASPAR yes 115499170
chr14 55131511 55131519 LMX1B JASPAR yes 115499171
chr14 55131511 55131519 NKX6-1 JASPAR yes 115499172
chr14 55131511 55131519 NKX6-2 JASPAR yes 115499173
chr14 55131511 55131519 VAX1 JASPAR yes 115499174
chr14 55131511 55131519 VAX2 JASPAR yes 115499175
chr14 55131511 55131519 VSX1 JASPAR yes 115499176
chr14 55131511 55131519 VSX2 JASPAR yes 115499177
Genes associated with rs571991342[chr14:55131516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More