EnhancerDB
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  3. rs571995755[chr6:108900948]
Enhancers that have rs571995755[chr6:108900948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571995755[chr6:108900948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108900938 108900950 TAL1 JASPAR yes 104179565
chr6 108900939 108900952 ZBTB18 JASPAR yes 104179566
chr6 108900940 108900950 NEUROG2 JASPAR yes 104179567
chr6 108900940 108900950 OLIG1 JASPAR yes 104179568
chr6 108900940 108900950 OLIG3 JASPAR yes 104179569
chr6 108900940 108900952 TAL1 JASPAR yes 104179570
Genes associated with rs571995755[chr6:108900948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More