EnhancerDB
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  3. rs572004652[chr1:41857822]
Enhancers that have rs572004652[chr1:41857822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572004652[chr1:41857822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41857804 41857824 RREB1 JASPAR yes 28384233
chr1 41857805 41857825 RREB1 JASPAR yes 28384234
chr1 41857807 41857827 RREB1 JASPAR yes 28384235
chr1 41857809 41857829 RREB1 JASPAR yes 28384237
chr1 41857811 41857831 RREB1 JASPAR yes 28384238
chr1 41857813 41857833 RREB1 JASPAR yes 28384239
chr1 41857815 41857835 RREB1 JASPAR yes 28384240
chr1 41857816 41857836 RREB1 JASPAR yes 28384241
chr1 41857817 41857832 RUNX2 JASPAR yes 28384242
chr1 41857819 41857839 RREB1 JASPAR yes 28384243
chr1 41857820 41857840 RREB1 JASPAR yes 28384244
chr1 41857821 41857841 RREB1 JASPAR yes 28384245
Genes associated with rs572004652[chr1:41857822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More