EnhancerDB
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  3. rs572024340[chr1:19751024]
Enhancers that have rs572024340[chr1:19751024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572024340[chr1:19751024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19751013 19751024 ELK4 JASPAR yes 27188375
chr1 19751013 19751026 ELF3 JASPAR yes 27188376
chr1 19751014 19751026 ELF1 JASPAR yes 27188377
chr1 19751014 19751026 ELF4 JASPAR yes 27188378
chr1 19751014 19751027 ELF1 JASPAR yes 27188379
Genes associated with rs572024340[chr1:19751024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More