EnhancerDB
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  3. rs572039721[chr12:120666558]
Enhancers that have rs572039721[chr12:120666558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572039721[chr12:120666558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063015
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063016
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063017
chr12 120666292 120667365 TCF7L2 GTRD no Colon (HCT116) 21578307
chr12 120666292 120667365 TCF7L2 GTRD no Colon (HCT116) 108063018
chr12 120666435 120666785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578308
chr12 120666435 120666785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063019
chr12 120666472 120666955 ZNF274 GTRD no Bone Marrow (K562) 21578309
chr12 120666472 120666955 ZNF274 GTRD no Bone Marrow (K562) 108063020
chr12 120666506 120667043 ZNF274 GTRD no Bone Marrow (K562) 21578310
chr12 120666506 120667043 ZNF274 GTRD no Bone Marrow (K562) 108063021
chr12 120666528 120666987 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578311
chr12 120666528 120666987 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063022
chr12 120666528 120667105 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578312
chr12 120666528 120667105 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063023
chr12 120666533 120667053 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578313
chr12 120666533 120667053 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063024
chr12 120666541 120666868 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578314
chr12 120666541 120666868 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063025
Genes associated with rs572039721[chr12:120666558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More