EnhancerDB
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  3. rs572053674[chr17:65394625]
Enhancers that have rs572053674[chr17:65394625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572053674[chr17:65394625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65394349 65395263 ZNF143 GTRD no Epithelial (MCF-7) 21782143
chr17 65394349 65395263 ZNF143 GTRD no Epithelial (MCF-7) 108285753
chr17 65394349 65395400 ZNF143 GTRD no Epithelial (MCF-7) 21782144
chr17 65394349 65395400 ZNF143 GTRD no Epithelial (MCF-7) 108285754
chr17 65394369 65395376 ZNF143 GTRD no Epithelial (MCF-7) 21782145
chr17 65394369 65395376 ZNF143 GTRD no Epithelial (MCF-7) 108285755
chr17 65394369 65395384 ZNF143 GTRD no Epithelial (MCF-7) 21782146
chr17 65394369 65395384 ZNF143 GTRD no Epithelial (MCF-7) 108285756
chr17 65394380 65395277 ZNF143 GTRD no Epithelial (MCF-7) 21782147
chr17 65394380 65395277 ZNF143 GTRD no Epithelial (MCF-7) 108285757
chr17 65394425 65395311 ZNF143 GTRD no Epithelial (MCF-7) 21782148
chr17 65394425 65395311 ZNF143 GTRD no Epithelial (MCF-7) 108285758
chr17 65394427 65395052 GATA3 GTRD no Thymus 21782149
chr17 65394427 65395052 GATA3 GTRD no Thymus 108285759
chr17 65394443 65395315 ZNF143 GTRD no Epithelial (MCF-7) 21782150
chr17 65394443 65395315 ZNF143 GTRD no Epithelial (MCF-7) 108285760
chr17 65394457 65396122 ZNF143 GTRD no Epithelial (MCF-7) 21782151
chr17 65394457 65396122 ZNF143 GTRD no Epithelial (MCF-7) 108285761
chr17 65394521 65395926 ZNF143 GTRD no Epithelial (MCF-7) 21782152
chr17 65394521 65395926 ZNF143 GTRD no Epithelial (MCF-7) 108285762
chr17 65394565 65395021 ZNF143 GTRD no Epithelial (MCF-7) 21782153
chr17 65394565 65395021 ZNF143 GTRD no Epithelial (MCF-7) 108285763
chr17 65394591 65395994 ZNF143 GTRD no Epithelial (MCF-7) 21782154
chr17 65394591 65395994 ZNF143 GTRD no Epithelial (MCF-7) 108285764
chr17 65394594 65395123 ZNF143 GTRD no Epithelial (MCF-7) 21782155
chr17 65394594 65395123 ZNF143 GTRD no Epithelial (MCF-7) 108285765
chr17 65394598 65395063 ZNF143 GTRD no Epithelial (MCF-7) 21782156
chr17 65394598 65395063 ZNF143 GTRD no Epithelial (MCF-7) 108285766
chr17 65394611 65395073 ZNF274 GTRD no Liver (HepG2) 108285767
chr17 65394613 65395006 ZNF143 GTRD no Epithelial (MCF-7) 21782157
chr17 65394613 65395006 ZNF143 GTRD no Epithelial (MCF-7) 108285768
chr17 65394616 65394636 RREB1 JASPAR yes 55497941
Genes associated with rs572053674[chr17:65394625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More