EnhancerDB
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  3. rs572083263[chr1:171395292]
Enhancers that have rs572083263[chr1:171395292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs572083263[chr1:171395292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171395277 171395298 IRF1 JASPAR yes 33079273
chr1 171395278 171395293 FOXP1 JASPAR yes 33079274
chr1 171395281 171395296 STAT2 JASPAR yes 33079276
chr1 171395289 171395300 RUNX1 JASPAR yes 33079277
chr1 171395292 171395304 NHLH1 JASPAR yes 33079278
Genes associated with rs572083263[chr1:171395292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More