EnhancerDB
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  3. rs572164939[chr1:8438999]
Enhancers that have rs572164939[chr1:8438999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572164939[chr1:8438999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8438989 8438999 TBR1 JASPAR yes 26545582
chr1 8438990 8438999 NFIX JASPAR yes 26545583
chr1 8438990 8439000 NFIA JASPAR yes 26545584
chr1 8438990 8439004 PLAG1 JASPAR yes 26545585
Genes associated with rs572164939[chr1:8438999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More