EnhancerDB
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  3. rs572166442[chr1:41870048]
Enhancers that have rs572166442[chr1:41870048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572166442[chr1:41870048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41870037 41870050 SMAD2 JASPAR yes 28385953
chr1 41870041 41870058 RARA JASPAR yes 28385955
Genes associated with rs572166442[chr1:41870048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More