EnhancerDB
  1. Home
  2. SNP
  3. rs572229076[chr16:24999149]
Enhancers that have rs572229076[chr16:24999149]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572229076[chr16:24999149]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24999133 24999149 POU4F2 JASPAR yes 10092474
chr16 24999133 24999149 POU4F3 JASPAR yes 10092475
chr16 24999139 24999149 HOXC10 JASPAR yes 10092476
chr16 24999139 24999149 HOXD13 JASPAR yes 10092477
chr16 24999139 24999150 HOXC11 JASPAR yes 10092478
chr16 24999139 24999150 HOXC13 JASPAR yes 10092479
chr16 24999139 24999150 HOXD12 JASPAR yes 10092480
chr16 24999140 24999150 GSX2 JASPAR yes 10092481
chr16 24999140 24999155 JUND JASPAR yes 10092482
chr16 24999141 24999149 NKX6-1 JASPAR yes 10092483
chr16 24999141 24999149 NKX6-2 JASPAR yes 10092484
chr16 24999141 24999151 POU6F2 JASPAR yes 10092485
chr16 24999141 24999154 JUN JASPAR yes 10092486
chr16 24999143 24999158 JUND JASPAR yes 10092487
chr16 24999144 24999157 JUN JASPAR yes 10092488
chr16 24999145 24999152 JUN TRANSFAC yes 10092489
Genes associated with rs572229076[chr16:24999149], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More