EnhancerDB
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  3. rs572242138[chr1:226891797]
Enhancers that have rs572242138[chr1:226891797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572242138[chr1:226891797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226890795 226891803 POLR2A UCSC Txn Factor no Conserved 107876276
chr1 226891069 226892789 TCF7L2 GTRD no Colon (HCT116) 21387253
chr1 226891069 226892789 TCF7L2 GTRD no Colon (HCT116) 107876298
Genes associated with rs572242138[chr1:226891797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More